Search results for "Membrane curvature"

showing 6 items of 6 documents

Plasmonic nanosensors reveal a height dependence of MinDE protein oscillations on membrane features

2018

6 p.-4 fig.

02 engineering and technologyEscherichia-coli010402 general chemistryCurvature01 natural sciencesBiochemistryCatalysisQuantitative Biology::Subcellular ProcessesColloid and Surface ChemistryNanosensorSpectroscopyPlasmonPhospholipidsHydrophobic residuesPlasmonic nanoparticlesChemistryScatteringSensorsGeneral ChemistryBinding021001 nanoscience & nanotechnology0104 chemical sciencesMembraneMembrane curvatureChemical physics0210 nano-technology
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Interaction of C 60 fullerenes with asymmetric and curved lipid membranes: a molecular dynamics study

2015

Interaction of fullerenes with asymmetric and curved DOPC/DOPS bicelles is studied by means of coarse-grained molecular dynamics simulations. The effects caused by asymmetric lipid composition of the membrane leaflets and the curvature of the membrane are analyzed. It is shown that the aggregates of fullerenes prefer to penetrate into the membrane in the regions of the moderately positive mean curvature. Upon penetration into the hydrophobic core of the membrane fullerenes avoid the regions of the extreme positive or the negative curvature. Fullerenes increase the ordering of lipid tails, which are in direct contact with them, but do not influence other lipids significantly. Our data sugges…

0301 basic medicine[ SDV.BBM.BP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsFullereneLipid BilayersGeneral Physics and AstronomyPhosphatidylserinesModel lipid bilayerMolecular Dynamics SimulationCurvatureQuantitative Biology::Cell BehaviorQuantitative Biology::Subcellular Processes03 medical and health sciencesMolecular dynamicsPhysics::Atomic and Molecular ClustersOrganic chemistryPhysical and Theoretical ChemistryComputingMilieux_MISCELLANEOUSPhysics::Biological PhysicsMean curvatureChemistryPenetration (firestop)[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biophysics030104 developmental biologyMembraneMembrane curvatureBiophysicsPhosphatidylcholineslipids (amino acids peptides and proteins)Fullerenes
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PspA adopts an ESCRT-III-like fold and remodels bacterial membranes

2021

Summary PspA is the main effector of the phage shock protein (Psp) system and preserves the bacterial inner membrane integrity and function. Here, we present the 3.6 A resolution cryoelectron microscopy (cryo-EM) structure of PspA assembled in helical rods. PspA monomers adopt a canonical ESCRT-III fold in an extended open conformation. PspA rods are capable of enclosing lipids and generating positive membrane curvature. Using cryo-EM, we visualized how PspA remodels membrane vesicles into μm-sized structures and how it mediates the formation of internalized vesicular structures. Hotspots of these activities are zones derived from PspA assemblies, serving as lipid transfer platforms and lin…

0303 health sciencesMembrane tubulationCryo-electron microscopyLipid bilayer fusionBiologyGeneral Biochemistry Genetics and Molecular BiologyESCRT03 medical and health sciences0302 clinical medicineMembraneMembrane fissionMembrane curvatureBiophysicsddc:610Phage shock030217 neurology & neurosurgery030304 developmental biology
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Curvature increases permeability of the plasma membrane for ions, water and the anti-cancer drugs cisplatin and gemcitabine

2019

ABSTRACTIn this work the permeability of a model asymmetric plasma membrane, for ions, water and the anti-cancer drugs cisplatin and gemcitabine is studied by means of all-atom molecular dynamics simulations. It is shown that permeability of the membranes increases from one to three orders of magnitude upon membrane bending depending on the compound and the sign of curvature. Our results show that the membrane curvature is an important factor which should be considered during evaluation of drug translocation.TOC GRAPHICS

Cell Membrane PermeabilityLipid Bilayerslcsh:MedicineAntineoplastic AgentsMolecular Dynamics SimulationCurvature01 natural sciencesDeoxycytidineArticleSupramolecular assemblyIonMembrane bending03 medical and health sciencesComputational biophysics0103 physical sciencesmedicineAnimalsHumanslcsh:Science030304 developmental biologyCisplatinIons0303 health sciences010304 chemical physicsChemistryCell Membranelcsh:RWaterMembrane structure and assemblyGemcitabineOrders of magnitude (mass)MembraneMembrane curvaturePermeability (electromagnetism)Drug deliveryBiophysicslcsh:QCisplatinmedicine.drugScientific Reports
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PspA adopts an ESCRT-III-like fold and remodels bacterial membranes

2020

SummaryPspA is the main effector of the phage shock protein (Psp) system and preserves the bacterial inner membrane integrity and function. Here, we present the 3.6 Å resolution cryo-EM structure of PspA assembled in helical rods. PspA monomers adopt a canonical ESCRT-III fold in an extended open conformation. PspA rods are capable of enclosing lipids and generate positive membrane curvature. Using cryo-EM we visualized how PspA remodels membrane vesicles into μm-sized structures and how it mediates the formation of internalized vesicular structures. Hot spots of these activities are zones derived from PspA assemblies, serving as lipid transfer platforms and linking previously separated lip…

MembraneMembrane curvatureEffectorChemistryBiophysicsLipid bilayer fusionPhage shockESCRTFunction (biology)Bacterial inner membrane
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EnCurv: Simple Technique of Maintaining Global Membrane Curvature in Molecular Dynamics Simulations.

2021

The EnCurv method for maintaining membrane curvature in molecular dynamics simulations is introduced. The method allows maintaining any desired curvature in a sector of lipid membrane bent in a single plane without adding any unphysical interactions into the system and without restrictions on lateral and transversal lipid diffusion and distribution. The current implementation is limited to the membranes curved in a single plane but generalization to arbitrary curvature and membrane topology is possible. The method is simple, easy to implement, and scales linearly with the system size. EnCurv is agnostic to the force field, simulation parameters, and membrane composition. The proof of princi…

PhysicsPhysics::Biological Physics010304 chemical physicsPlane (geometry)Mathematical analysisBent molecular geometryCurvature01 natural sciencesForce field (chemistry)Computer Science ApplicationsQuantitative Biology::Subcellular ProcessesMolecular dynamicsMembraneMembrane curvature0103 physical sciencesPhysical and Theoretical ChemistryDiffusion (business)Journal of chemical theory and computation
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